Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTATGTGTGCTGGGG
.(((((((((((...(((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002768
GeneSymbolCHMP1A
Binding site1165,1184
Score0.923
Seed1
Au0.397
Energy-20.5
Binding len19
Me-6.675
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure