Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CATGAGTATGTCAGGC
.((((((((((.(((.......&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002808
GeneSymbolPSMD2
Binding site491,507
Score0.923
Seed1
Au0.471
Energy-17.1
Binding len16
Me-7.373
Phylopstem5.2393225
Phylopflank6.0055616375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure