Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGCTCTGTGTGCCATGGA
.(((((((((((..((((((((&))))))))..))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002819
GeneSymbolPTBP1
Binding site28,51
Score0.846
Seed1
Au0.382
Energy-25.1
Binding len23
Me-5.939
Phylopstem2.4652925275000004
Phylopflank2.431137558392857
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
Position5UTR
2D Structure