Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTTAGGTGCCAGGC
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002827
GeneSymbolPTPN1
Binding site3018,3033
Score0.923
Seed1
Au0.485
Energy-15.3
Binding len10
Me-14.322
Phylopstem0.08376975000000002
Phylopflank-0.04534422999999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure