Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTAAACAGTCTCAAATATGGGAAATTTTATAGCCAACCACGGCTGTGAG
(((((((((.(((((......&.))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330450
GeneSymbolMAP2K6
Binding site10512,10564
Score0.923
Seed1
Au0.544
Energy-20.7
Binding len17
Me-5.413
Phylopstem-0.23581625555555552
Phylopflank0.01287775125000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure