Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCAGTGGGAAAGTCAAGCCTGGTA
(((.(((...((.(((((((((&))))))))).))..........))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002868
GeneSymbolRAB5B
Binding site235,265
Score0.846
Seed0
Au0.515
Energy-16.2
Binding len30
Me-12.871
Phylopstem0.06320995555555556
Phylopflank0.49939195999999997
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure