Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTCAGCCAGCAGCTCCAT
.((.(((((((((((..(((.&)))...))))).)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017024159
GeneSymbolUSP43
Binding site1618,1640
Score0.923
Seed0
Au0.368
Energy-21.4
Binding len22
Me-7.058
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure