Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTTGTGCACTGGATCCCTCCTCCTTTCTCTGCCAGGC
.((((((((((((.(((((...&)))))))))).......................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002908
GeneSymbolREL
Binding site5708,5749
Score0.846
Seed1
Au0.529
Energy-19.1
Binding len41
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end5
Position3UTR
2D Structure