Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATACCTGCCAGGTG
((((((((((((..........&))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002954
GeneSymbolRPS27A
Binding site677,694
Score0.846
Seed1
Au0.559
Energy-15.9
Binding len17
Me-7.052
Phylopstem4.8931250625
Phylopflank6.125502324999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure