Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTATGCTATTGAAGTTTTGGCAATTGACTATAGTGTGAGCCAGGA
.((((((.((((.(((((....&.))))).)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002994
GeneSymbolCXCL5
Binding site692,742
Score0.846
Seed1
Au0.618
Energy-20.9
Binding len19
Me-7.396
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure