Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAGAGACATTGTCTTCTACTGTTCTGCCAGGTT
((((((((.(((..(((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002999
GeneSymbolSDC4
Binding site777,811
Score0.962
Seed1
Au0.515
Energy-20.3
Binding len20
Me-7.14
Phylopstem1.520425875
Phylopflank2.2415086915
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure