Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAACTACATTATCATGTATATCTATTGTATGCTGGT
..((((((((((..((((((..&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003022
GeneSymbolSH3BGRL
Binding site1621,1657
Score0.846
Seed1
Au0.75
Energy-17.5
Binding len18
Me-7.103
Phylopstem2.567101
Phylopflank4.6185881900000005
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure