Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTGTGCCGGGTG
((((((((((............&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003029
GeneSymbolSHC1
Binding site393,406
Score0.846
Seed1
Au0.353
Energy-16.5
Binding len12
Me-13.224
Phylopstem4.4045400661
Phylopflank4.421122075762501
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure