Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAAAAATGCCAGGG
.((((((((....((((.....&))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017024591
GeneSymbolEFCAB5
Binding site3753,3769
Score0.923
Seed1
Au0.618
Energy-16.7
Binding len16
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure