Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTGCAGAGCAAG
((((..(((((((((......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017024591
GeneSymbolEFCAB5
Binding site872,887
Score0.846
Seed0
Au0.618
Energy-17.4
Binding len15
Me-10.191
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure