Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCCGGA
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003057
GeneSymbolSLC22A1
Binding site961,972
Score0.846
Seed1
Au0.471
Energy-16.7
Binding len11
Me-8.071
Phylopstem3.6183316
Phylopflank4.534918475
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure