Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGGCCACTGCCAGGC
.(((((((....((((((....&))))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003061
GeneSymbolSLIT1
Binding site4566,4586
Score0.846
Seed1
Au0.338
Energy-19.1
Binding len20
Me-12.264
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure