Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTGCAAGTGTGCCGAGGG
.((((((((((..((((.((..&)).)))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003062
GeneSymbolSLIT3
Binding site4597,4617
Score0.846
Seed1
Au0.456
Energy-18.6
Binding len20
Me-8.429
Phylopstem1.419567090909091
Phylopflank2.68900462625
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure