Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTCAATGATGCCAGGG
.((((((((.((.((.((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003075
GeneSymbolSMARCC2
Binding site3195,3211
Score0.846
Seed1
Au0.368
Energy-17.6
Binding len16
Me-6.558
Phylopstem3.776637375
Phylopflank3.38823189775
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure