Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGCCAGGTC
((((((((......((((....&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003083
GeneSymbolSNAPC2
Binding site1446,1459
Score0.846
Seed1
Au0.412
Energy-15.8
Binding len13
Me-14.554
Phylopstem0.55284021
Phylopflank4.057552908500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure