Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTTTATATGCCAGT
..((((((((.(((((((....&)))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003117
GeneSymbolSPAM1
Binding site821,840
Score0.923
Seed1
Au0.647
Energy-17.1
Binding len19
Me-7.782
Phylopstem3.27966925
Phylopflank3.4272588124999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure