Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTAGAGACTATAAAATTGGGAAAATTACTTCGGCCAAATCACTTGTGGGGTTA
.((((((((((((((((((..&.)))))).........))).........))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_003117
GeneSymbolSPAM1
Binding site1029,1083
Score0.846
Seed1
Au0.618
Energy-21.2
Binding len38
Me-3.793
Phylopstem2.423592441666666
Phylopflank1.3961447774999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure