Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCCAAGGATGCATTGCTGTTGTGGTGCCAGA
..((((((((((((((((((((&))))))))...............)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003128
GeneSymbolSPTBN1
Binding site755,792
Score0.923
Seed1
Au0.5
Energy-20.1
Binding len37
Me-4.957
Phylopstem4.533047677777777
Phylopflank5.68106129
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure