Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTATGTTGGTGCTTTTCTCAGGC
.((((((((.((((((((((((&))))))))))))))))......)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003162
GeneSymbolSTRN
Binding site6511,6538
Score1.0
Seed1
Au0.735
Energy-18.4
Binding len27
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure