Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTTCCTCCGACCCCCTACTGCTCGGCCGCGGCTGCC
..(((((((((((((...(((&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025118
GeneSymbolPLEKHH3
Binding site362,402
Score1.0
Seed1
Au0.221
Energy-27.6
Binding len21
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure