Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCAGAGAACCTGGGCACTTGCTGCCTGATGCCCACCCCTGCCAGTC
.(((((((((((((((((((..&))))))))))....))).........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017025216
GeneSymbolPPP1R1B
Binding site1109,1158
Score0.846
Seed1
Au0.353
Energy-22.3
Binding len49
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end6
Position3UTR
2D Structure