Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAATAATGGTCCATGCCTGTCTACAGTTGGTTGTCCAGGTG
((((((((..((((((((((..&.))))))).)))..)).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003291
GeneSymbolTPP2
Binding site1134,1176
Score0.923
Seed1
Au0.544
Energy-23.6
Binding len24
Me-6.236
Phylopstem0.35400145727272725
Phylopflank0.388799048
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end6
PositionCDS
2D Structure