Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAGTTACATGATATGACTCAAATTTTTAAAGGATCACTTTGGCTGCCAGGTG
((((((((..(((.((.(((((&.))))))).)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003295
GeneSymbolTPT1
Binding site3258,3311
Score0.846
Seed1
Au0.618
Energy-21.9
Binding len23
Me-7.093
Phylopstem2.750225125
Phylopflank3.3260162162500007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure