Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACACTGGTTACTTTGGCTATAAGATGTGTGCCAGGG
.(((((((((((.(((((....&.)))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003300
GeneSymbolTRAF3
Binding site1577,1616
Score0.846
Seed1
Au0.471
Energy-23.9
Binding len21
Me-5.082
Phylopstem6.670512272727273
Phylopflank5.482594866125002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure