Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCTCGCCGCGATGCCGGAGAAGAGGCCCTTCGAGCGGCTGCC
..((((((((..(((.((((.&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025372
GeneSymbolNPEPPS
Binding site308,357
Score0.846
Seed1
Au0.324
Energy-19.9
Binding len17
Me-11.362
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure