Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCATAGGTCGGGA
.((((((.....((((((((((&))))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003345
GeneSymbolUBE2I
Binding site1420,1439
Score0.815
Seed1
Au0.412
Energy-17.7
Binding len19
Me-14.577
Phylopstem0.29006750000000003
Phylopflank0.7101965624999997
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure