Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCAGCAGCC
..((.((((((((((......&)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025514
GeneSymbolCDH2
Binding site2472,2486
Score0.846
Seed0
Au0.441
Energy-19.5
Binding len14
Me-9.309
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure