Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCGGCACAGCTGTGGCCAGGTA
(((((((.((((.(((......&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003371
GeneSymbolVAV2
Binding site2380,2403
Score0.923
Seed1
Au0.382
Energy-18.1
Binding len18
Me-7.54
Phylopstem2.065385
Phylopflank3.7435427172499995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure