Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTACACTTTATGCCGGA
..((((((((...((((((((.&))))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003373
GeneSymbolVCL
Binding site5069,5089
Score0.846
Seed1
Au0.544
Energy-17.7
Binding len20
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure