Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGAGCCTCAGTGCAGCTGCC
..(((((((((..((..((((&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025615
GeneSymbolTRAPPC8
Binding site3030,3054
Score0.915
Seed1
Au0.456
Energy-20.6
Binding len18
Me-9.826
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure