Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTCTGCAGCTGA
...(((((((((((((.....&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025615
GeneSymbolTRAPPC8
Binding site4112,4127
Score0.923
Seed0
Au0.603
Energy-19.7
Binding len15
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure