Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTTCATTGTGTGCATTGTCGGCCCTTCCTCGGGTT
(((((((((((((((.((....&)).))))))))))................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003470
GeneSymbolUSP7
Binding site4431,4466
Score0.846
Seed1
Au0.426
Energy-17.4
Binding len35
Me-4.171
Phylopstem1.981650612903226
Phylopflank1.99131021125
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end3
Position3UTR
2D Structure