Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTACACAAACTGCTTTACAACAGGCCAGGC
.((((((......(((((((((&)))))))))..................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003472
GeneSymbolDEK
Binding site475,509
Score0.808
Seed1
Au0.574
Energy-17.3
Binding len34
Me-15.867
Phylopstem0.2337326666666667
Phylopflank0.13445685874999996
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end8
PositionCDS
2D Structure