Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACAACTGCGTCAGGGAGCTGCGGT
((((((((((((((((.((((&)))))))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025904
GeneSymbolPTPRM
Binding site3455,3483
Score1.0
Seed1
Au0.426
Energy-22.2
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure