Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAGAAACACACACACAGCCACAGTTGCC
..(((((((.((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017025904
GeneSymbolPTPRM
Binding site4632,4666
Score0.923
Seed1
Au0.426
Energy-20.9
Binding len16
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure