Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGATATTTATCATGGGAGGGCTCATTCTTGTCATCCCATTCCTACTCATCCTTGGGTCC
.(((((((.((((((((((..&.)))))))))))).............................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_003554
GeneSymbolOR1E2
Binding site617,678
Score0.923
Seed1
Au0.544
Energy-25.0
Binding len48
Me-4.85
Phylopstem2.4752891000000004
Phylopflank0.9371313949999999
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end6
PositionCDS
2D Structure