Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAACTTAAAATACTTATTTTTCTTTAAACTGCAGGAGTCA
.((((((((((..(((((...&))))).........................))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_003574
GeneSymbolVAPA
Binding site5618,5660
Score0.846
Seed1
Au0.735
Energy-20.9
Binding len42
Me-8.429
Phylopstem-0.04797972727272728
Phylopflank-0.24275184374999992
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure