Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCGACGCAGCTTTAGCGAG
((((((((((.((((((((((&)))).))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017026123
GeneSymbolSH2D3A
Binding site470,495
Score0.923
Seed1
Au0.368
Energy-23.2
Binding len25
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure