Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCCTTGTAGACGCCAGGA
.((((((.(((((.(((.....&))).)))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003626
GeneSymbolPPFIA1
Binding site3183,3202
Score0.942
Seed1
Au0.471
Energy-17.3
Binding len19
Me-6.964
Phylopstem5.278711666666667
Phylopflank4.715236666249998
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure