Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCAGTCAGTCCCAGGCTGCAGCTGTC
..(((((((((((((..((((&))))..))...........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017026146
GeneSymbolCEACAM5
Binding site1469,1500
Score0.923
Seed1
Au0.426
Energy-21.7
Binding len31
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure