Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCATTGATGCAACAGGTA
(((((((((.(((((((((...&))))).))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003715
GeneSymbolUSO1
Binding site1470,1492
Score0.846
Seed1
Au0.618
Energy-18.7
Binding len22
Me-5.18
Phylopstem-0.38948389
Phylopflank0.03895953875000001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure