Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGTTGGGGTTGGTTTACAGAACACCTGTCCTGCCTGTGCCAGC
..(((((((((((((((((...&))))))))).............................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003724
GeneSymbolJRK
Binding site5282,5329
Score0.846
Seed1
Au0.353
Energy-19.4
Binding len47
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end5
Position3UTR
2D Structure