Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAACTGCCAGTGTTATACGTCTCATGCTCTGTGTGCCAGGTG
((((((((((((..(((((...&.)).)))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003747
GeneSymbolTNKS
Binding site6274,6316
Score1.0
Seed1
Au0.5
Energy-24.8
Binding len22
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure