Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCCCTCTTCCCGAGGCCCTGCTGCCATGTTGTATGCCCCAGAAGGTA
((((((((((((((((((....&.))))...)))))))))).....)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003761
GeneSymbolVAMP8
Binding site477,527
Score0.885
Seed1
Au0.412
Energy-20.2
Binding len28
Me-3.938
Phylopstem6.462598096923078
Phylopflank5.976675437750001
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure