Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTTTGGAGGTGTGTCAGGC
.((((((((((...((((....&)))).......)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003780
GeneSymbolB4GALT2
Binding site1109,1131
Score0.923
Seed1
Au0.485
Energy-18.4
Binding len22
Me-9.286
Phylopstem2.1428836
Phylopflank5.280910867499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure